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More Publications

Scholarly publications

Group members in bold
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  • Migicovsky Z, Myles S (2017) Exploiting wild relatives for genomics-assisted breeding of perennial crops. Frontiers in Plant Science 8:460
  • McClure KA, Gardner KM, Toivonen PMA, Hampson CR, Song J, Forney CF, DeLong J, Rajcan I, Myles S (2016)ÌýQTL analysis of soft scald in two apple populations. Horticulture Research 3:16043
  • Migicovsky Z, Sawler J, Money D, Eibach R, Miller AJ, Luby JJ, Jamieson AR, Velasco D, von Kintzel S, Warner J, Wuhrer W, Brown PJ,ÌýMyles SÌý(2016) Genomic ancestry estimation quantifies use of wild species in grape breeding. BMC GenomicsÌý17:478
  • Migicovsky Z, Gardner KM, Money D, Sawler J,ÌýBloom JS, Moffett P, Chao CT, Schwaninger H, Fazio G,ÌýZhong GY, Myles S (2016) Genome to phenome mapping in apple using historical data. ÌýThe Plant Genome 9:2
  • Goto-Yamamoto N, Sawler J, Myles S (2015) Genetic analysis of East Asian grape cultivars suggests hybridization with wild Vitis. PLoS ONE 10:e0140841
  • Sawler J, Stout JM, Gardner KM, Hudson D, Vidmar J, Butler L, Page JE, Myles S (2015) The genetic structure of marijuana and hemp. PLoS ONE 10:e0133292
  • Money D, Gardner KM, Migicovsky Z, Schwaninger H, Zhong GY, Myles S (2015) LinkImpute – fast and accurate genotype imputation for non-model organisms. G3: Genes, Genomes, Genetics 5:2383
  • Myles S, Mahanil S, Harriman J,ÌýGardner KM, Franklin JL, Reisch BI, Ramming DW, Owens CL, Li L, Buckler ES, Cadle-Davidson L (2015)ÌýGenetic mapping in grapevine using SNP microarray intensity values.ÌýMolecular BreedingÌý35:88
  • McClure KA, Sawler J, Gardner KM, Money D, Myles SÌý(2014) Genomics: a potential panacea for the perennial problem.ÌýAmerican Journal of BotanyÌý101:1597 []
  • Gardner KM, Brown PJ, Cooke TF,ÌýCann S, Costa F, Bustamante CD, Velasco R, Troggio M,ÌýMyles SÌý(2014) Fast and cost-effective genetic mapping in apple using next-generation sequencing. G3:ÌýGenes, Genomes, GeneticsÌý4:1681ÌýÌý[]
  • Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, Prins B, Li L,ÌýMyles S, Sinha NR (2014) A modern ampelography: a genetic basis for leaf shape and venation patterning inÌýVitis vinifera.ÌýPlant PhysiologyÌý164:259 []
  • Sawler J, Reisch BI, Aradhya MK, Prins BH, Zhong GY, Schwaninger H, Simon C, Buckler ES,ÌýMylesÌýSÌý(2013) Genomics assisted ancestry deconvolution in grape.ÌýPLoS ONEÌý8:e80791 []
  • Miller AJ, Matasci N, Aradhya MK, Prins B, Zhong GY, Schwaninger H, Simon C, Buckler ES,ÌýMyles SÌý(2013) Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls.ÌýPLoS ONEÌý8:e78680Ìý[]
  • McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G, Dempewolf H, Dingkuhn M, Feuillet C, Gepts P, Grattapaglia D, Guarino L, Jackson S, Knapp S, Langridge P, Lawton-Rauh A, Lijua Q, Lusty C, Michael T,ÌýMyles S, Naito K, Nelson RL, Pontarollo R, Richards CM, Rieseberg L, Ross-Ibarra J, Rounsley S, Hamilton RS, Schurr U, Stein N, Tomooka N, van der Knaap E, van Tassel D, Toll J, Valls J, Varshney RK, Ward J, Waugh R, Wenzl P, Zamir D (2013) Agriculture: Feeding the future.ÌýNatureÌý499:23 []
  • Myles SÌý(2013) Improving fruit and wine: what does genomics have to offer?ÌýTrends in GeneticsÌý29:190 []
  • Emanuelli F, Lorenzi S, Grzeskowiak L, Catalano V, Stefanini M, Troggio M,ÌýMyles S, Martinez-Zapater JM, Zyprian E, Moreira FM, Grando MS (2013)ÌýGenetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape.ÌýBMC Plant BiologyÌý13:39 []
  • Kenny E, Timpson N, Sikora M, Yee MC, Moreno-Estrada A, Eng C, Huntsman S, Gonzalez Buchard E, Stoneking M, Bustamante CD,ÌýMyles SÌý(2012) Melanesian blond hair is caused by an amino acid change in TYRP1.ÌýScienceÌý336:554Ìý
  • Mahanil S, Ramming D, Cadle-Davidson M, Owens C, Garris A,ÌýMyles S, Cadle-Davidson L (2012) Development of marker sets useful in the early selection ofÌýRen4Ìýpowdery mildew penetration resistance and seedlessness for table and raisin grape breeding.ÌýTheoretical and Applied GeneticsÌý124:23Ìý
  • Delfin F,ÌýMyles S, Hughes D, Illek R, Pakendorf B, Choi Y, van Oven M, Kayser M, Stoneking M (2012) Bridging Near and Remote Oceania: MtDNA and NRY Variation in the Solomon Islands.ÌýÌýMolecular Biology and EvolutionÌý29:545Ìý
  • Brown PJ, Upadyayula N, Mahone G, Tian F, Bradbury PJ,ÌýMyles S, Holland JB, McMullen MD, Buckler ES, Rocheford TR (2011) Distinct genetic architectures for male and female inflorescence traits of Maize.ÌýPLoS GeneticsÌý7:e1002383Ìý
  • Myles S, Lea R, Ohashi J, Chambers G, Weiss J, Hardouin E, Engelken J, Macartney-Coxson D, Eccles D, Naka I, Kimura R, Inaoka T, Matsumura Y, Stoneking M (2011) Testing the thrifty gene hypothesis: the Gly482Ser variant in PPARGC1A is associated with BMI in Tongans.ÌýBMC Medical GeneticsÌý12:10Ìý
  • Gunnarsdóttir ED, Nandineni MR, Li M,ÌýMyles S, Gil D, PakendorfB, Stoneking M (2011) Larger mtDNA than Y-chromosome differences between matrilocal and patrilocal groups from Sumatra.ÌýNature CommunicationsÌý2:228Ìý
  • Myles S, Boyko AR, Brown PJ, Grassi F, Owens CL, Aradhya M, Prins B, Reynolds A, Chia JM, Ware D, Bustamante CD, Buckler ES (2011) Genetic structure and domestication history of the grape.ÌýPNASÌý108:3530Ìý
  • Delfin F, Salvador JM, Calacal GC, Perdigon HB, Tabbada KA, Villamor LP, Halos SC, Gunnarsdóttir E,ÌýMyles S, Hughes DA, Xu S, Jin L, Lao O, Kayser M, Hurles ME, Stoneking M, De Ungria MCA (2011) The Y-chromosome landscape of the Philippines: extensive heterogeneity and varying genetic affinities of Negrito and non-Negrito groups.ÌýEuropean Journal of Human Genetics 19:224Ìý
  • Brown PJ,ÌýMyles S, Kresovich S (2011) Genetic support for phenotype-based racial classification in sorghum.ÌýCrop ScienceÌý51:1-7Ìý
  • Myles S, Chia J-M, Hurwitz B, Simon C, Zhong GY, Buckler E, Ware D (2010) Rapid Genomic Characterization of the GenusÌýVitis.ÌýPLoS ONE5:e8219Ìý
  • Laland K, Odling-Smee J,ÌýMyles SÌý(2010) How culture shaped the human genome: bringing genetics and the human sciences together.ÌýNature Reviews GeneticsÌý11:137Ìý
  • Myles S, Peiffer J, Brown PJ, Ersoz ES, Zhang Z, Costich DE, Buckler ES. (2009) Association Mapping: Critical Considerations Shift from Genotyping to Experimental Design.ÌýPlant CellÌý21:2194Ìý
  • Myles S, Stoneking M, Timpson N (2009) An assessment of the portability of ancestry informative markers between human populations.ÌýBMC Medical GenomicsÌý2:45Ìý
  • Silander K, TangH,ÌýMylesS, Jakkula E, Timpson N, Cavalli-Sforza L, Peltonen L. (2009) Worldwide patterns of haplotype diversity at 9p21.3, a locus associated with type 2 diabetes and coronary heart disease.ÌýGenome Medicine1:51Ìý
  • Hillmer AM, Freudenberg J,ÌýMyles S, Herms S, Tang K, Brockschmidt FF, Ruan Y, Stoneking M, Nöthen MM. (2009) Signature of recent positive selection at the human androgen receptor locus and its relationship to the susceptibility variants for male pattern baldness.ÌýHuman GeneticsÌý126:255Ìý
  • Bryk J, Harouin E, Pugach I, Hughes D, Strotmann R, Stoneking M,ÌýMyles S.Ìý(2008) Positive selection in East Asians for an EDAR allele that enhances NF-κB activation.ÌýPLoS ONEÌý3:e2209Ìý
  • Myles S, Davison D, Barrett J, Stoneking M, Timpson N. (2008) Worldwide population differentiation at disease-associated SNPs.ÌýBMC Medical GenomicsÌý1:22Ìý
  • Myles S, Tang K, Somel M, Kelso J, Stoneking M. (2008) Identification and analysis of high Fst regions from genome-wide SNP data from three human populations.ÌýAnnals of Human GeneticsÌý72:99
  • Myles S, Hughes D, Stoneking M. (2008) Detecting local selection in humans. In Santos C, Lima M (eds) Recent Advances in Molecular Biology and Evolution: Applications to Biological Anthropology
  • Meyer M, Stenzel U, Pruefer K,ÌýMyles S, Hofreiter M. (2007) Targeted high-throughput sequencing of tagged nucleic acid samples.ÌýNucleic Acids ResearchÌý35:e97Ìý
  • Myles S, Hradetzky E, Engelken J, Lao O, Nürnberg P, Trent R, Kayser M, Stoneking M. (2007) Identification of a candidate genetic variant for the high prevalence of type II diabetes in Polynesians.ÌýEuropean Journal of Human GeneticsÌý15:584-589Ìý
  • Myles S, Somel M, Tang K, Kelso J, Stoneking M. (2007) Identifying genes underlying skin pigmentation differences among human populations.ÌýHuman GeneticsÌý120:613Ìý
  • Myles S, Bouzekri N, Haverfield E, Cherkaoui M, Dugoujon JM, Ward R (2005) Genetic evidence in support of a shared European-North African dairying origin.ÌýHuman GeneticsÌý117:34Ìý
  • Dukas R, Morse DH, andÌýMyles S.Ìý(2005) Experience levels of individuals in natural bee populations and their ecological implications.ÌýCanadian Journal of ZoologyÌý83:492Ìý